Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs60222075 chr9:133356413 C/G 2.12E-5 506 22.73 21.3 14.98 KM Plot
LGG rs60729238 chr6:53113448 G/A 1.85E-5 509 22.47 23.5 14.8 KM Plot
LGG rs60809294 chr6:53113570 A/G 1.85E-5 509 22.47 23.5 14.8 KM Plot
LGG rs60887662 chr14:24413737 G/A 4.04E-5 508 23.63 21.15 15.53 KM Plot
LGG rs60901156 chr14:24413773 T/C 4.04E-5 508 23.63 21.15 15.53 KM Plot
LGG rs60939040 chr14:24412292 G/A 4.06E-5 508 23.58 21.15 16.63 KM Plot
LGG rs6095097 chr20:47015721 A/G 5.96E-5 509 20.43 21 23.52 KM Plot
LGG rs6107469 chr20:4471423 A/G 3.94E-6 509 12.53 19.55 22.87 KM Plot
LGG rs61368402 chr14:24413854 T/C 4.04E-5 508 23.63 21.15 15.53 KM Plot
LGG rs61392500 chr5:169007729 T/A 1.7E-8 505 22.47 23.85 6.83 KM Plot
LGG rs61566951 chr10:107899478 G/C 8.68E-5 501 21.6 28.68 13 KM Plot
LGG rs61710531 chr14:24421090 G/GA 4.04E-5 508 23.63 21.15 15.53 KM Plot
LGG rs61790910 chr3:153660987 C/T 0 509 22.57 22.73 0.23 KM Plot
LGG rs61790911 chr3:153661818 C/T 0 509 22.57 22.73 0.23 KM Plot
LGG rs61790953 chr3:153662165 T/C 0 507 22.58 22.78 0.23 KM Plot